[C:\pFindWorkspace\PXD025545\ : start from Data Extraction] Process 1: Process 2: Process 1: ********************************************* Process 2: ********************************************* Process 1: / pParse2.0 (x64) from pFind Studio \ Process 2: / pParse2.0 (x64) from pFind Studio \ Process 1: / Email : pfind@ict.ac.cn \ Process 2: / Email : pfind@ict.ac.cn \ Process 1: \ Website: http://pfind.ict.ac.cn / Process 2: \ Website: http://pfind.ict.ac.cn / Process 1: ********************************************* Process 2: ********************************************* Process 1: Process 2: Process 1: The license will expire in 2100-1-1 Process 2: The license will expire in 2100-1-1 Process 1: [pParse] - --------- BEGIN PARAMETERS ----------- Process 2: [pParse] - --------- BEGIN PARAMETERS ----------- Process 1: [pParse] - 01: check_activationcenter = 1 Process 2: [pParse] - 01: check_activationcenter = 1 Process 1: [pParse] - 02: co-elute = 1 Process 2: [pParse] - 02: co-elute = 1 Process 1: [pParse] - 03: cut_similiar_mono = 1 Process 2: [pParse] - 03: cut_similiar_mono = 1 Process 1: [pParse] - 04: datanum = 3 Process 2: [pParse] - 04: datanum = 3 Process 1: [pParse] - 05: datapath1 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.mzML Process 2: [pParse] - 05: datapath1 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.mzML Process 1: [pParse] - 06: datapath2 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.mzML Process 2: [pParse] - 06: datapath2 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.mzML Process 1: [pParse] - 07: datapath3 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.mzML Process 2: [pParse] - 07: datapath3 = C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.mzML Process 1: [pParse] - 08: delete_msn = 0 Process 2: [pParse] - 08: delete_msn = 0 Process 1: [pParse] - 09: input_format = mzml Process 2: [pParse] - 09: input_format = mzml Process 1: [pParse] - 10: intensity = 1 Process 2: [pParse] - 10: intensity = 1 Process 1: [pParse] - 11: ipv_file = .\IPV.txt Process 2: [pParse] - 11: ipv_file = .\IPV.txt Process 1: [pParse] - 12: isolation_width = 2.000000 Process 2: [pParse] - 12: isolation_width = 2.000000 Process 1: [pParse] - 13: logfilepath = C:\Users\robbe\Mzml_files\PXD022545\.proc1 Process 2: [pParse] - 13: logfilepath = C:\Users\robbe\Mzml_files\PXD022545\.proc2 Process 1: [pParse] - 14: m/z = 5 Process 2: [pParse] - 14: m/z = 5 Process 1: [pParse] - 15: mars_model = 4 Process 2: [pParse] - 15: mars_model = 4 Process 1: [pParse] - 16: mars_threshold = -0.500000 Process 2: [pParse] - 16: mars_threshold = -0.500000 Process 1: [pParse] - 17: mstol = 20.000000 Process 2: [pParse] - 17: mstol = 20.000000 Process 1: [pParse] - 18: mstolppm = 1 Process 2: [pParse] - 18: mstolppm = 1 Process 1: [pParse] - 19: output_mgf = 1 Process 2: [pParse] - 19: output_mgf = 1 Process 1: [pParse] - 20: output_msb = 0 Process 2: [pParse] - 20: output_msb = 0 Process 1: [pParse] - 21: output_pf = 1 Process 2: [pParse] - 21: output_pf = 1 Process 1: [pParse] - 22: outputpath = Process 2: [pParse] - 22: outputpath = Process 1: [pParse] - 23: recalibrate_window = 7.000000 Process 2: [pParse] - 23: recalibrate_window = 7.000000 Process 1: [pParse] - 24: rewrite_files = 0 Process 2: [pParse] - 24: rewrite_files = 0 Process 1: [pParse] - --------- END PARAMETERS ------------- Process 2: [pParse] - --------- END PARAMETERS ------------- Process 1: [pParse] - pParse writes logs in C:\Users\robbe\Mzml_files\PXD022545\.proc1\pParsePlusLog.txt Process 2: [pParse] - pParse writes logs in C:\Users\robbe\Mzml_files\PXD022545\.proc2\pParsePlusLog.txt Process 1: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.mzML" Process 2: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.mzML" Process 1: [pXtract] - The software will expire in 1/01/2100 Process 2: [pXtract] - The software will expire in 1/01/2100 Process 1: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.mzML Process 2: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.mzML Process 1: [pXtract] - Reading Scans, Scan Num = 1000 Process 2: [pXtract] - Reading Scans, Scan Num = 1000 Process 1: [pXtract] - Reading Scans, Scan Num = 2000 Process 2: [pXtract] - Reading Scans, Scan Num = 2000 Process 1: [pXtract] - Reading Scans, Scan Num = 3000 Process 2: [pXtract] - Reading Scans, Scan Num = 3000 Process 1: [pXtract] - Reading Scans, Scan Num = 4000 Process 2: [pXtract] - Reading Scans, Scan Num = 4000 Process 1: [pXtract] - Reading Scans, Scan Num = 5000 Process 2: [pXtract] - Reading Scans, Scan Num = 5000 Process 1: [pXtract] - Reading Scans, Scan Num = 6000 Process 2: [pXtract] - Reading Scans, Scan Num = 6000 Process 1: [pXtract] - Reading Scans, Scan Num = 7000 Process 2: [pXtract] - Reading Scans, Scan Num = 7000 Process 1: [pXtract] - Reading Scans, Scan Num = 8000 Process 2: [pXtract] - Reading Scans, Scan Num = 8000 Process 1: [pXtract] - Reading Scans, Scan Num = 9000 Process 2: [pXtract] - Reading Scans, Scan Num = 9000 Process 1: [pXtract] - Reading Scans, Scan Num = 10000 Process 2: [pXtract] - Reading Scans, Scan Num = 10000 Process 1: [pXtract] - Reading Scans, Scan Num = 11000 Process 2: [pXtract] - Reading Scans, Scan Num = 11000 Process 1: [pXtract] - Reading Scans, Scan Num = 12000 Process 2: [pXtract] - Reading Scans, Scan Num = 12000 Process 1: [pXtract] - Reading Scans, Scan Num = 13000 Process 2: [pXtract] - Reading Scans, Scan Num = 13000 Process 1: [pXtract] - Reading Scans, Scan Num = 14000 Process 2: [pXtract] - Reading Scans, Scan Num = 14000 Process 1: [pXtract] - Reading Scans, Scan Num = 15000 Process 2: [pXtract] - Reading Scans, Scan Num = 15000 Process 1: [pXtract] - Reading Scans, Scan Num = 16000 Process 2: [pXtract] - Reading Scans, Scan Num = 16000 Process 1: [pXtract] - Reading Scans, Scan Num = 17000 Process 2: [pXtract] - Reading Scans, Scan Num = 17000 Process 1: [pXtract] - Reading Scans, Scan Num = 18000 Process 2: [pXtract] - Reading Scans, Scan Num = 18000 Process 1: [pXtract] - Reading Scans, Scan Num = 19000 Process 2: [pXtract] - Reading Scans, Scan Num = 19000 Process 1: [pXtract] - Reading Scans, Scan Num = 20000 Process 2: [pXtract] - Reading Scans, Scan Num = 20000 Process 1: [pXtract] - Reading Scans, Scan Num = 21000 Process 2: [pXtract] - Reading Scans, Scan Num = 21000 Process 1: [pXtract] - Reading Scans, Scan Num = 22000 Process 2: [pXtract] - Reading Scans, Scan Num = 22000 Process 1: [pXtract] - Reading Scans, Scan Num = 23000 Process 2: [pXtract] - Reading Scans, Scan Num = 23000 Process 1: [pXtract] - Reading Scans, Scan Num = 24000 Process 2: [pXtract] - Reading Scans, Scan Num = 24000 Process 1: [pXtract] - Reading Scans, Scan Num = 25000 Process 2: [pXtract] - Reading Scans, Scan Num = 25000 Process 1: [pXtract] - Reading Scans, Scan Num = 26000 Process 2: [pXtract] - Reading Scans, Scan Num = 26000 Process 1: [pXtract] - Reading Scans, Scan Num = 27000 Process 2: [pXtract] - Reading Scans, Scan Num = 27000 Process 1: [pXtract] - Reading Scans, Scan Num = 28000 Process 2: [pXtract] - Reading Scans, Scan Num = 28000 Process 1: [pXtract] - Reading Scans, Scan Num = 29000 Process 2: [pXtract] - Reading Scans, Scan Num = 29000 Process 1: [pXtract] - Reading Scans, Scan Num = 30000 Process 2: [pXtract] - Reading Scans, Scan Num = 30000 Process 1: [pXtract] - Reading Scans, Scan Num = 31000 Process 2: [pXtract] - Reading Scans, Scan Num = 31000 Process 1: [pXtract] - Reading Scans, Scan Num = 32000 Process 2: [pXtract] - Reading Scans, Scan Num = 32000 Process 1: [pXtract] - Reading Scans, Scan Num = 33000 Process 2: [pXtract] - Reading Scans, Scan Num = 33000 Process 1: [pXtract] - Reading Scans, Scan Num = 34000 Process 2: [pXtract] - Reading Scans, Scan Num = 34000 Process 1: [pXtract] - Reading Scans, Scan Num = 35000 Process 2: [pXtract] - Reading Scans, Scan Num = 35000 Process 1: [pXtract] - Reading Scans, Scan Num = 36000 Process 2: [pXtract] - Reading Scans, Scan Num = 36000 Process 1: [pXtract] - Reading Scans, Scan Num = 37000 Process 2: [pXtract] - Reading Scans, Scan Num = 37000 Process 1: [pXtract] - Reading Scans, Scan Num = 38000 Process 2: [pXtract] - Reading Scans, Scan Num = 38000 Process 1: [pXtract] - Reading Scans, Scan Num = 39000 Process 2: [pXtract] - Reading Scans, Scan Num = 39000 Process 1: [pXtract] - Reading Scans, Scan Num = 40000 Process 2: [pXtract] - Reading Scans, Scan Num = 40000 Process 1: [pXtract] - Reading Scans, Scan Num = 41000 Process 2: [pXtract] - Reading Scans, Scan Num = 41000 Process 1: [pXtract] - Reading Scans, Scan Num = 42000 Process 2: [pXtract] - Reading Scans, Scan Num = 42000 Process 1: [pXtract] - Reading Scans, Scan Num = 43000 Process 2: [pXtract] - Reading Scans, Scan Num = 43000 Process 1: [pXtract] - Reading Scans, Scan Num = 44000 Process 2: [pXtract] - Reading Scans, Scan Num = 44000 Process 1: [pXtract] - Reading Scans, Scan Num = 45000 Process 2: [pXtract] - Reading Scans, Scan Num = 45000 Process 1: [pXtract] - Reading Scans, Scan Num = 46000 Process 2: [pXtract] - Reading Scans, Scan Num = 46000 Process 1: [pXtract] - Reading Scans, Scan Num = 47000 Process 2: [pXtract] - Reading Scans, Scan Num = 47000 Process 1: [pXtract] - Reading Scans, Scan Num = 48000 Process 2: [pXtract] - Reading Scans, Scan Num = 48000 Process 1: [pXtract] - Reading Scans, Scan Num = 49000 Process 2: [pXtract] - Reading Scans, Scan Num = 49000 Process 1: [pXtract] - Reading Scans, Scan Num = 50000 Process 2: [pXtract] - Reading Scans, Scan Num = 50000 Process 1: [pXtract] - Reading Scans, Scan Num = 51000 Process 2: [pXtract] - Reading Scans, Scan Num = 51000 Process 1: [pXtract] - Reading Scans, Scan Num = 52000 Process 2: [pXtract] - Reading Scans, Scan Num = 52000 Process 1: [pXtract] - Reading Scans, Scan Num = 53000 Process 2: [pXtract] - Reading Scans, Scan Num = 53000 Process 1: [pXtract] - Reading Scans, Scan Num = 54000 Process 2: [pXtract] - Reading Scans, Scan Num = 54000 Process 1: [pXtract] - Reading Scans, Scan Num = 55000 Process 2: [pXtract] - Reading Scans, Scan Num = 55000 Process 1: [pXtract] - Reading Scans, Scan Num = 56000 Process 2: [pXtract] - Reading Scans, Scan Num = 56000 Process 1: [pXtract] - Reading Scans, Scan Num = 57000 Process 2: [pXtract] - Reading Scans, Scan Num = 57000 Process 1: [pXtract] - Reading Scans, Scan Num = 58000 Process 2: [pXtract] - Reading Scans, Scan Num = 58000 Process 1: [pXtract] - Reading Scans, Scan Num = 59000 Process 2: [pXtract] - Reading Scans, Scan Num = 59000 Process 1: [pXtract] - Reading Scans, Scan Num = 60000 Process 2: [pXtract] - Reading Scans, Scan Num = 60000 Process 1: [pXtract] - Reading Scans, Scan Num = 61000 Process 2: [pXtract] - Reading Scans, Scan Num = 61000 Process 1: [pXtract] - Reading Scans, Scan Num = 62000 Process 2: [pXtract] - Reading Scans, Scan Num = 62000 Process 1: [pXtract] - Reading Scans, Scan Num = 63000 Process 2: [pXtract] - Reading Scans, Scan Num = 63000 Process 1: [pXtract] - Reading Scans, Scan Num = 64000 Process 2: [pXtract] - Reading Scans, Scan Num = 64000 Process 1: [pXtract] - Reading Scans, Scan Num = 65000 Process 2: [pXtract] - Reading Scans, Scan Num = 65000 Process 1: [pXtract] - Reading Scans, Scan Num = 66000 Process 2: [pXtract] - Reading Scans, Scan Num = 66000 Process 1: [pXtract] - Reading Scans, Scan Num = 67000 Process 2: [pXtract] - Reading Scans, Scan Num = 67000 Process 1: [pXtract] - Reading Scans, Scan Num = 68000 Process 2: [pXtract] - Reading Scans, Scan Num = 68000 Process 1: [pXtract] - Reading Scans, Scan Num = 69000 Process 2: [pXtract] - Reading Scans, Scan Num = 69000 Process 1: [pXtract] - Reading Scans, Scan Num = 70000 Process 2: [pXtract] - Reading Scans, Scan Num = 70000 Process 1: [pXtract] - Reading Scans, Scan Num = 71000 Process 2: [pXtract] - Reading Scans, Scan Num = 71000 Process 1: [pXtract] - Reading Scans, Scan Num = 72000 Process 2: [pXtract] - Reading Scans, Scan Num = 72000 Process 1: [pXtract] - Reading Scans, Scan Num = 73000 Process 2: [pXtract] - Reading Scans, Scan Num = 73000 Process 1: [pXtract] - Reading Scans, Scan Num = 74000 Process 2: [pXtract] - Reading Scans, Scan Num = 74000 Process 1: [pXtract] - Reading Scans, Scan Num = 75000 Process 2: [pXtract] - Reading MS1:12981, MS2:61386, total:74367 Process 1: [pXtract] - Reading Scans, Scan Num = 76000 Process 2: [pXtract] - Output Files Completed! Process 1: [pXtract] - Reading Scans, Scan Num = 77000 Process 2: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.mzML Process 1: [pXtract] - Reading Scans, Scan Num = 78000 Process 2: [pXtract] - == == == Time elapsed: 54,074s. == == == Process 1: [pXtract] - Reading Scans, Scan Num = 79000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms1 Process 1: [pXtract] - Reading MS1:12346, MS2:67156, total:79502 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms2 Process 1: [pXtract] - Output Files Completed! Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.pf1 Process 1: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.mzML Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.pf2 Process 1: [pXtract] - == == == Time elapsed: 58,291s. == == == Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.mgf Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms1 Process 2: [pParse] - Extracting MS2, Scan Num = 1000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms2 Process 2: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.pf1 Process 2: [pParse] - Extracting MS2, Scan Num = 2000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.pf2 Process 2: [pParse] - Extracting MS2, Scan Num = 3000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.mgf Process 1: [pParse] - Extracting MS2, Scan Num = 1000 Process 2: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pParse] - Extracting MS2, Scan Num = 5000 Process 2: [pParse] - Extracting MS1, Scan Num = 3000 Process 1: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pParse] - Extracting MS2, Scan Num = 9000 Process 2: [pParse] - Extracting MS1, Scan Num = 4000 Process 1: [pParse] - Extracting MS1, Scan Num = 3000 Process 1: [pParse] - Extracting MS2, Scan Num = 13000 Process 2: [pParse] - Extracting MS1, Scan Num = 5000 Process 2: [pParse] - Extracting MS2, Scan Num = 17000 Process 1: [pParse] - Extracting MS1, Scan Num = 4000 Process 1: [pParse] - Extracting MS2, Scan Num = 17000 Process 2: [pParse] - Extracting MS1, Scan Num = 6000 Process 2: [pParse] - Extracting MS2, Scan Num = 22000 Process 1: [pParse] - Extracting MS1, Scan Num = 5000 Process 1: [pParse] - Extracting MS2, Scan Num = 22000 Process 2: [pParse] - Extracting MS1, Scan Num = 7000 Process 2: [pParse] - Extracting MS2, Scan Num = 27000 Process 1: [pParse] - Extracting MS1, Scan Num = 6000 Process 1: [pParse] - Extracting MS2, Scan Num = 28000 Process 2: [pParse] - Extracting MS1, Scan Num = 8000 Process 2: [pParse] - Extracting MS2, Scan Num = 33000 Process 1: [pParse] - Extracting MS1, Scan Num = 7000 Process 1: [pParse] - Extracting MS2, Scan Num = 34000 Process 2: [pParse] - Extracting MS1, Scan Num = 9000 Process 2: [pParse] - Extracting MS2, Scan Num = 40000 Process 1: [pParse] - Extracting MS1, Scan Num = 8000 Process 1: [pParse] - Extracting MS2, Scan Num = 40000 Process 2: [pParse] - Extracting MS1, Scan Num = 10000 Process 2: [pParse] - Extracting MS2, Scan Num = 46000 Process 1: [pParse] - Extracting MS1, Scan Num = 9000 Process 1: [pParse] - Extracting MS2, Scan Num = 48000 Process 2: [pParse] - Extracting MS1, Scan Num = 11000 Process 2: [pParse] - Extracting MS2, Scan Num = 54000 Process 1: [pParse] - Extracting MS1, Scan Num = 10000 Process 1: [pParse] - Extracting MS2, Scan Num = 57000 Process 2: [pParse] - Extracting MS1, Scan Num = 12000 Process 1: [pParse] - Extracting MS2, Scan Num = 59000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms1 Process 1: [pParse] - Extracting MS2, Scan Num = 60000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms1 Process 1: [pParse] - Extracting MS2, Scan Num = 61000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms1: 12981 Process 1: [pParse] - Extracting MS2, Scan Num = 62000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.pf1 Process 1: [pParse] - Extracting MS2, Scan Num = 63000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.pf1 Process 1: [pParse] - Extracting MS2, Scan Num = 64000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.pf1: 12981 Process 1: [pParse] - Extracting MS1, Scan Num = 11000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms2 Process 1: [pParse] - Extracting MS2, Scan Num = 65000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms2 Process 1: [pParse] - Extracting MS2, Scan Num = 66000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.ms2: 61386 Process 1: [pParse] - Extracting MS1, Scan Num = 12000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.pf2 Process 1: [pParse] - Extracting MS2, Scan Num = 67000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.pf2 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms1 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.pf2: 61386 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms1 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.mgf Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms1: 12346 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.mgf Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.pf1 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.mgf: 61386 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.pf1 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.csv Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.pf1: 12346 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.csv Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms2 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01.csv: 61386 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms2 Process 2: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.mzML" Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.ms2: 67156 Process 2: [pXtract] - The software will expire in 1/01/2100 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.pf2 Process 2: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.mzML Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.pf2 Process 2: [pXtract] - Reading Scans, Scan Num = 1000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.pf2: 67156 Process 2: [pXtract] - Reading Scans, Scan Num = 2000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.mgf Process 2: [pXtract] - Reading Scans, Scan Num = 3000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.mgf Process 2: [pXtract] - Reading Scans, Scan Num = 4000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.mgf: 67156 Process 2: [pXtract] - Reading Scans, Scan Num = 5000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.csv Process 2: [pXtract] - Reading Scans, Scan Num = 6000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.csv Process 2: [pXtract] - Reading Scans, Scan Num = 7000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234.csv: 67156 Process 2: [pXtract] - Reading Scans, Scan Num = 8000 Process 1: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.mzML" Process 2: [pXtract] - Reading Scans, Scan Num = 9000 Process 1: [pXtract] - The software will expire in 1/01/2100 Process 2: [pXtract] - Reading Scans, Scan Num = 10000 Process 1: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.mzML Process 2: [pXtract] - Reading Scans, Scan Num = 11000 Process 1: [pXtract] - Reading Scans, Scan Num = 1000 Process 2: [pXtract] - Reading Scans, Scan Num = 12000 Process 1: [pXtract] - Reading Scans, Scan Num = 2000 Process 2: [pXtract] - Reading Scans, Scan Num = 13000 Process 1: [pXtract] - Reading Scans, Scan Num = 3000 Process 2: [pXtract] - Reading Scans, Scan Num = 14000 Process 1: [pXtract] - Reading Scans, Scan Num = 4000 Process 2: [pXtract] - Reading Scans, Scan Num = 15000 Process 1: [pXtract] - Reading Scans, Scan Num = 5000 Process 2: [pXtract] - Reading Scans, Scan Num = 16000 Process 1: [pXtract] - Reading Scans, Scan Num = 6000 Process 2: [pXtract] - Reading Scans, Scan Num = 17000 Process 1: [pXtract] - Reading Scans, Scan Num = 7000 Process 2: [pXtract] - Reading Scans, Scan Num = 18000 Process 1: [pXtract] - Reading Scans, Scan Num = 8000 Process 2: [pXtract] - Reading Scans, Scan Num = 19000 Process 1: [pXtract] - Reading Scans, Scan Num = 9000 Process 2: [pXtract] - Reading Scans, Scan Num = 20000 Process 1: [pXtract] - Reading Scans, Scan Num = 10000 Process 2: [pXtract] - Reading Scans, Scan Num = 21000 Process 1: [pXtract] - Reading Scans, Scan Num = 11000 Process 2: [pXtract] - Reading Scans, Scan Num = 22000 Process 1: [pXtract] - Reading Scans, Scan Num = 12000 Process 2: [pXtract] - Reading Scans, Scan Num = 23000 Process 1: [pXtract] - Reading Scans, Scan Num = 13000 Process 2: [pXtract] - Reading Scans, Scan Num = 24000 Process 1: [pXtract] - Reading Scans, Scan Num = 14000 Process 2: [pXtract] - Reading Scans, Scan Num = 25000 Process 1: [pXtract] - Reading Scans, Scan Num = 15000 Process 2: [pXtract] - Reading Scans, Scan Num = 26000 Process 1: [pXtract] - Reading Scans, Scan Num = 16000 Process 2: [pXtract] - Reading Scans, Scan Num = 27000 Process 1: [pXtract] - Reading Scans, Scan Num = 17000 Process 2: [pXtract] - Reading Scans, Scan Num = 28000 Process 1: [pXtract] - Reading Scans, Scan Num = 18000 Process 2: [pXtract] - Reading Scans, Scan Num = 29000 Process 1: [pXtract] - Reading Scans, Scan Num = 19000 Process 2: [pXtract] - Reading Scans, Scan Num = 30000 Process 1: [pXtract] - Reading Scans, Scan Num = 20000 Process 2: [pXtract] - Reading Scans, Scan Num = 31000 Process 1: [pXtract] - Reading Scans, Scan Num = 21000 Process 2: [pXtract] - Reading Scans, Scan Num = 32000 Process 1: [pXtract] - Reading Scans, Scan Num = 22000 Process 2: [pXtract] - Reading Scans, Scan Num = 33000 Process 1: [pXtract] - Reading Scans, Scan Num = 23000 Process 2: [pXtract] - Reading Scans, Scan Num = 34000 Process 1: [pXtract] - Reading Scans, Scan Num = 24000 Process 2: [pXtract] - Reading Scans, Scan Num = 35000 Process 1: [pXtract] - Reading Scans, Scan Num = 25000 Process 2: [pXtract] - Reading Scans, Scan Num = 36000 Process 1: [pXtract] - Reading Scans, Scan Num = 26000 Process 2: [pXtract] - Reading Scans, Scan Num = 37000 Process 1: [pXtract] - Reading Scans, Scan Num = 27000 Process 2: [pXtract] - Reading Scans, Scan Num = 38000 Process 1: [pXtract] - Reading Scans, Scan Num = 28000 Process 2: [pXtract] - Reading Scans, Scan Num = 39000 Process 1: [pXtract] - Reading Scans, Scan Num = 29000 Process 2: [pXtract] - Reading Scans, Scan Num = 40000 Process 1: [pXtract] - Reading Scans, Scan Num = 30000 Process 2: [pXtract] - Reading Scans, Scan Num = 41000 Process 1: [pXtract] - Reading Scans, Scan Num = 31000 Process 2: [pXtract] - Reading Scans, Scan Num = 42000 Process 1: [pXtract] - Reading Scans, Scan Num = 32000 Process 2: [pXtract] - Reading Scans, Scan Num = 43000 Process 1: [pXtract] - Reading Scans, Scan Num = 33000 Process 2: [pXtract] - Reading Scans, Scan Num = 44000 Process 1: [pXtract] - Reading Scans, Scan Num = 34000 Process 2: [pXtract] - Reading Scans, Scan Num = 45000 Process 1: [pXtract] - Reading Scans, Scan Num = 35000 Process 2: [pXtract] - Reading Scans, Scan Num = 46000 Process 1: [pXtract] - Reading Scans, Scan Num = 36000 Process 2: [pXtract] - Reading Scans, Scan Num = 47000 Process 1: [pXtract] - Reading Scans, Scan Num = 37000 Process 2: [pXtract] - Reading Scans, Scan Num = 48000 Process 1: [pXtract] - Reading Scans, Scan Num = 38000 Process 2: [pXtract] - Reading Scans, Scan Num = 49000 Process 1: [pXtract] - Reading Scans, Scan Num = 39000 Process 2: [pXtract] - Reading Scans, Scan Num = 50000 Process 1: [pXtract] - Reading Scans, Scan Num = 40000 Process 2: [pXtract] - Reading Scans, Scan Num = 51000 Process 1: [pXtract] - Reading Scans, Scan Num = 41000 Process 2: [pXtract] - Reading Scans, Scan Num = 52000 Process 1: [pXtract] - Reading Scans, Scan Num = 42000 Process 2: [pXtract] - Reading Scans, Scan Num = 53000 Process 1: [pXtract] - Reading Scans, Scan Num = 43000 Process 2: [pXtract] - Reading Scans, Scan Num = 54000 Process 1: [pXtract] - Reading Scans, Scan Num = 44000 Process 2: [pXtract] - Reading Scans, Scan Num = 55000 Process 1: [pXtract] - Reading Scans, Scan Num = 45000 Process 2: [pXtract] - Reading Scans, Scan Num = 56000 Process 1: [pXtract] - Reading Scans, Scan Num = 46000 Process 2: [pXtract] - Reading Scans, Scan Num = 57000 Process 1: [pXtract] - Reading Scans, Scan Num = 47000 Process 2: [pXtract] - Reading Scans, Scan Num = 58000 Process 1: [pXtract] - Reading Scans, Scan Num = 48000 Process 2: [pXtract] - Reading Scans, Scan Num = 59000 Process 1: [pXtract] - Reading Scans, Scan Num = 49000 Process 2: [pXtract] - Reading Scans, Scan Num = 60000 Process 1: [pXtract] - Reading Scans, Scan Num = 50000 Process 2: [pXtract] - Reading Scans, Scan Num = 61000 Process 1: [pXtract] - Reading Scans, Scan Num = 51000 Process 2: [pXtract] - Reading Scans, Scan Num = 62000 Process 1: [pXtract] - Reading Scans, Scan Num = 52000 Process 2: [pXtract] - Reading Scans, Scan Num = 63000 Process 1: [pXtract] - Reading Scans, Scan Num = 53000 Process 2: [pXtract] - Reading Scans, Scan Num = 64000 Process 1: [pXtract] - Reading Scans, Scan Num = 54000 Process 2: [pXtract] - Reading Scans, Scan Num = 65000 Process 1: [pXtract] - Reading Scans, Scan Num = 55000 Process 2: [pXtract] - Reading Scans, Scan Num = 66000 Process 1: [pXtract] - Reading Scans, Scan Num = 56000 Process 2: [pXtract] - Reading Scans, Scan Num = 67000 Process 1: [pXtract] - Reading Scans, Scan Num = 57000 Process 2: [pXtract] - Reading Scans, Scan Num = 68000 Process 1: [pXtract] - Reading Scans, Scan Num = 58000 Process 2: [pXtract] - Reading Scans, Scan Num = 69000 Process 1: [pXtract] - Reading Scans, Scan Num = 59000 Process 2: [pXtract] - Reading Scans, Scan Num = 70000 Process 1: [pXtract] - Reading Scans, Scan Num = 60000 Process 2: [pXtract] - Reading Scans, Scan Num = 71000 Process 1: [pXtract] - Reading Scans, Scan Num = 61000 Process 2: [pXtract] - Reading Scans, Scan Num = 72000 Process 1: [pXtract] - Reading Scans, Scan Num = 62000 Process 2: [pXtract] - Reading Scans, Scan Num = 73000 Process 1: [pXtract] - Reading Scans, Scan Num = 63000 Process 2: [pXtract] - Reading Scans, Scan Num = 74000 Process 1: [pXtract] - Reading Scans, Scan Num = 64000 Process 2: [pXtract] - Reading MS1:12964, MS2:61684, total:74648 Process 1: [pXtract] - Reading Scans, Scan Num = 65000 Process 2: [pXtract] - Output Files Completed! Process 1: [pXtract] - Reading Scans, Scan Num = 66000 Process 2: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.mzML Process 1: [pXtract] - Reading Scans, Scan Num = 67000 Process 2: [pXtract] - == == == Time elapsed: 53,441s. == == == Process 1: [pXtract] - Reading Scans, Scan Num = 68000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms1 Process 1: [pXtract] - Reading Scans, Scan Num = 69000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms2 Process 1: [pXtract] - Reading Scans, Scan Num = 70000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.pf1 Process 1: [pXtract] - Reading Scans, Scan Num = 71000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.pf2 Process 1: [pXtract] - Reading Scans, Scan Num = 72000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.mgf Process 1: [pXtract] - Reading Scans, Scan Num = 73000 Process 2: [pParse] - Extracting MS2, Scan Num = 1000 Process 1: [pXtract] - Reading Scans, Scan Num = 74000 Process 2: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pXtract] - Reading Scans, Scan Num = 75000 Process 2: [pParse] - Extracting MS2, Scan Num = 2000 Process 1: [pXtract] - Reading Scans, Scan Num = 76000 Process 2: [pParse] - Extracting MS2, Scan Num = 3000 Process 1: [pXtract] - Reading Scans, Scan Num = 77000 Process 2: [pParse] - Extracting MS2, Scan Num = 4000 Process 1: [pXtract] - Reading Scans, Scan Num = 78000 Process 2: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pXtract] - Reading MS1:12496, MS2:65862, total:78358 Process 2: [pParse] - Extracting MS2, Scan Num = 5000 Process 1: [pXtract] - Output Files Completed! Process 2: [pParse] - Extracting MS2, Scan Num = 6000 Process 1: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.mzML Process 2: [pParse] - Extracting MS2, Scan Num = 7000 Process 1: [pXtract] - == == == Time elapsed: 57,001s. == == == Process 2: [pParse] - Extracting MS2, Scan Num = 8000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms1 Process 2: [pParse] - Extracting MS1, Scan Num = 3000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms2 Process 2: [pParse] - Extracting MS2, Scan Num = 9000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.pf1 Process 2: [pParse] - Extracting MS2, Scan Num = 10000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.pf2 Process 2: [pParse] - Extracting MS2, Scan Num = 11000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.mgf Process 1: [pParse] - Extracting MS2, Scan Num = 1000 Process 2: [pParse] - Extracting MS1, Scan Num = 4000 Process 1: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pParse] - Extracting MS2, Scan Num = 5000 Process 2: [pParse] - Extracting MS1, Scan Num = 5000 Process 1: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pParse] - Extracting MS2, Scan Num = 9000 Process 2: [pParse] - Extracting MS1, Scan Num = 6000 Process 1: [pParse] - Extracting MS1, Scan Num = 3000 Process 2: [pParse] - Extracting MS2, Scan Num = 25000 Process 1: [pParse] - Extracting MS1, Scan Num = 4000 Process 2: [pParse] - Extracting MS1, Scan Num = 7000 Process 2: [pParse] - Extracting MS2, Scan Num = 30000 Process 1: [pParse] - Extracting MS1, Scan Num = 5000 Process 1: [pParse] - Extracting MS2, Scan Num = 19000 Process 2: [pParse] - Extracting MS1, Scan Num = 8000 Process 2: [pParse] - Extracting MS2, Scan Num = 34000 Process 1: [pParse] - Extracting MS1, Scan Num = 6000 Process 1: [pParse] - Extracting MS2, Scan Num = 25000 Process 2: [pParse] - Extracting MS1, Scan Num = 9000 Process 2: [pParse] - Extracting MS2, Scan Num = 40000 Process 1: [pParse] - Extracting MS1, Scan Num = 7000 Process 1: [pParse] - Extracting MS2, Scan Num = 31000 Process 2: [pParse] - Extracting MS1, Scan Num = 10000 Process 2: [pParse] - Extracting MS2, Scan Num = 47000 Process 1: [pParse] - Extracting MS1, Scan Num = 8000 Process 1: [pParse] - Extracting MS2, Scan Num = 38000 Process 2: [pParse] - Extracting MS1, Scan Num = 11000 Process 2: [pParse] - Extracting MS2, Scan Num = 54000 Process 1: [pParse] - Extracting MS1, Scan Num = 9000 Process 1: [pParse] - Extracting MS2, Scan Num = 49000 Process 2: [pParse] - Extracting MS1, Scan Num = 12000 Process 1: [pParse] - Extracting MS1, Scan Num = 10000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms1 Process 1: [pParse] - Extracting MS2, Scan Num = 50000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms1 Process 1: [pParse] - Extracting MS2, Scan Num = 51000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms1: 12964 Process 1: [pParse] - Extracting MS2, Scan Num = 52000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.pf1 Process 1: [pParse] - Extracting MS2, Scan Num = 53000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.pf1 Process 1: [pParse] - Extracting MS2, Scan Num = 54000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.pf1: 12964 Process 1: [pParse] - Extracting MS2, Scan Num = 55000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms2 Process 1: [pParse] - Extracting MS2, Scan Num = 56000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms2 Process 1: [pParse] - Extracting MS2, Scan Num = 57000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.ms2: 61684 Process 1: [pParse] - Extracting MS2, Scan Num = 58000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.pf2 Process 1: [pParse] - Extracting MS2, Scan Num = 59000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.pf2 Process 1: [pParse] - Extracting MS1, Scan Num = 11000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.pf2: 61684 Process 1: [pParse] - Extracting MS2, Scan Num = 60000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.mgf Process 1: [pParse] - Extracting MS2, Scan Num = 61000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.mgf Process 1: [pParse] - Extracting MS2, Scan Num = 62000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.mgf: 61684 Process 1: [pParse] - Extracting MS2, Scan Num = 63000 Process 2: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.csv Process 1: [pParse] - Extracting MS2, Scan Num = 64000 Process 2: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.csv Process 1: [pParse] - Extracting MS2, Scan Num = 65000 Process 2: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02.csv: 61684 Process 1: [pParse] - Extracting MS1, Scan Num = 12000 Process 2: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.mzML" Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms1 Process 2: [pXtract] - The software will expire in 1/01/2100 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms1 Process 2: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.mzML Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms1: 12496 Process 2: [pXtract] - Reading Scans, Scan Num = 1000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.pf1 Process 2: [pXtract] - Reading Scans, Scan Num = 2000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.pf1 Process 2: [pXtract] - Reading Scans, Scan Num = 3000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.pf1: 12496 Process 2: [pXtract] - Reading Scans, Scan Num = 4000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms2 Process 2: [pXtract] - Reading Scans, Scan Num = 5000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms2 Process 2: [pXtract] - Reading Scans, Scan Num = 6000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.ms2: 65862 Process 2: [pXtract] - Reading Scans, Scan Num = 7000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.pf2 Process 2: [pXtract] - Reading Scans, Scan Num = 8000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.pf2 Process 2: [pXtract] - Reading Scans, Scan Num = 9000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.pf2: 65862 Process 2: [pXtract] - Reading Scans, Scan Num = 10000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.mgf Process 2: [pXtract] - Reading Scans, Scan Num = 11000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.mgf Process 2: [pXtract] - Reading Scans, Scan Num = 12000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.mgf: 65862 Process 2: [pXtract] - Reading Scans, Scan Num = 13000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.csv Process 2: [pXtract] - Reading Scans, Scan Num = 14000 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.csv Process 2: [pXtract] - Reading Scans, Scan Num = 15000 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719.csv: 65862 Process 2: [pXtract] - Reading Scans, Scan Num = 16000 Process 1: [pParse] - .\xtract_xml.exe -ms -a -i 1 -m 5 -o "C:\Users\robbe\Mzml_files\PXD022545" "C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.mzML" Process 2: [pXtract] - Reading Scans, Scan Num = 17000 Process 1: [pXtract] - The software will expire in 1/01/2100 Process 2: [pXtract] - Reading Scans, Scan Num = 18000 Process 1: [pXtract] - Begin to extract C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.mzML Process 2: [pXtract] - Reading Scans, Scan Num = 19000 Process 1: [pXtract] - Reading Scans, Scan Num = 1000 Process 2: [pXtract] - Reading Scans, Scan Num = 20000 Process 1: [pXtract] - Reading Scans, Scan Num = 2000 Process 2: [pXtract] - Reading Scans, Scan Num = 21000 Process 1: [pXtract] - Reading Scans, Scan Num = 3000 Process 2: [pXtract] - Reading Scans, Scan Num = 22000 Process 1: [pXtract] - Reading Scans, Scan Num = 4000 Process 2: [pXtract] - Reading Scans, Scan Num = 23000 Process 1: [pXtract] - Reading Scans, Scan Num = 5000 Process 2: [pXtract] - Reading Scans, Scan Num = 24000 Process 1: [pXtract] - Reading Scans, Scan Num = 6000 Process 2: [pXtract] - Reading Scans, Scan Num = 25000 Process 1: [pXtract] - Reading Scans, Scan Num = 7000 Process 2: [pXtract] - Reading Scans, Scan Num = 26000 Process 1: [pXtract] - Reading Scans, Scan Num = 8000 Process 2: [pXtract] - Reading Scans, Scan Num = 27000 Process 1: [pXtract] - Reading Scans, Scan Num = 9000 Process 2: [pXtract] - Reading Scans, Scan Num = 28000 Process 1: [pXtract] - Reading Scans, Scan Num = 10000 Process 2: [pXtract] - Reading Scans, Scan Num = 29000 Process 1: [pXtract] - Reading Scans, Scan Num = 11000 Process 2: [pXtract] - Reading Scans, Scan Num = 30000 Process 1: [pXtract] - Reading Scans, Scan Num = 12000 Process 2: [pXtract] - Reading Scans, Scan Num = 31000 Process 1: [pXtract] - Reading Scans, Scan Num = 13000 Process 2: [pXtract] - Reading Scans, Scan Num = 32000 Process 1: [pXtract] - Reading Scans, Scan Num = 14000 Process 2: [pXtract] - Reading Scans, Scan Num = 33000 Process 1: [pXtract] - Reading Scans, Scan Num = 15000 Process 2: [pXtract] - Reading Scans, Scan Num = 34000 Process 1: [pXtract] - Reading Scans, Scan Num = 16000 Process 2: [pXtract] - Reading Scans, Scan Num = 35000 Process 1: [pXtract] - Reading Scans, Scan Num = 17000 Process 2: [pXtract] - Reading Scans, Scan Num = 36000 Process 1: [pXtract] - Reading Scans, Scan Num = 18000 Process 2: [pXtract] - Reading Scans, Scan Num = 37000 Process 1: [pXtract] - Reading Scans, Scan Num = 19000 Process 2: [pXtract] - Reading Scans, Scan Num = 38000 Process 1: [pXtract] - Reading Scans, Scan Num = 20000 Process 2: [pXtract] - Reading Scans, Scan Num = 39000 Process 1: [pXtract] - Reading Scans, Scan Num = 21000 Process 2: [pXtract] - Reading Scans, Scan Num = 40000 Process 1: [pXtract] - Reading Scans, Scan Num = 22000 Process 2: [pXtract] - Reading Scans, Scan Num = 41000 Process 1: [pXtract] - Reading Scans, Scan Num = 23000 Process 2: [pXtract] - Reading Scans, Scan Num = 42000 Process 1: [pXtract] - Reading Scans, Scan Num = 24000 Process 2: [pXtract] - Reading Scans, Scan Num = 43000 Process 1: [pXtract] - Reading Scans, Scan Num = 25000 Process 2: [pXtract] - Reading Scans, Scan Num = 44000 Process 1: [pXtract] - Reading Scans, Scan Num = 26000 Process 2: [pXtract] - Reading Scans, Scan Num = 45000 Process 1: [pXtract] - Reading Scans, Scan Num = 27000 Process 2: [pXtract] - Reading Scans, Scan Num = 46000 Process 1: [pXtract] - Reading Scans, Scan Num = 28000 Process 2: [pXtract] - Reading Scans, Scan Num = 47000 Process 1: [pXtract] - Reading Scans, Scan Num = 29000 Process 2: [pXtract] - Reading Scans, Scan Num = 48000 Process 1: [pXtract] - Reading Scans, Scan Num = 30000 Process 2: [pXtract] - Reading Scans, Scan Num = 49000 Process 1: [pXtract] - Reading Scans, Scan Num = 31000 Process 2: [pXtract] - Reading Scans, Scan Num = 50000 Process 1: [pXtract] - Reading Scans, Scan Num = 32000 Process 2: [pXtract] - Reading Scans, Scan Num = 51000 Process 1: [pXtract] - Reading Scans, Scan Num = 33000 Process 2: [pXtract] - Reading Scans, Scan Num = 52000 Process 1: [pXtract] - Reading Scans, Scan Num = 34000 Process 2: [pXtract] - Reading Scans, Scan Num = 53000 Process 1: [pXtract] - Reading Scans, Scan Num = 35000 Process 2: [pXtract] - Reading Scans, Scan Num = 54000 Process 1: [pXtract] - Reading Scans, Scan Num = 36000 Process 2: [pXtract] - Reading Scans, Scan Num = 55000 Process 1: [pXtract] - Reading Scans, Scan Num = 37000 Process 2: [pXtract] - Reading Scans, Scan Num = 56000 Process 1: [pXtract] - Reading Scans, Scan Num = 38000 Process 2: [pXtract] - Reading Scans, Scan Num = 57000 Process 1: [pXtract] - Reading Scans, Scan Num = 39000 Process 2: [pXtract] - Reading Scans, Scan Num = 58000 Process 1: [pXtract] - Reading Scans, Scan Num = 40000 Process 2: [pXtract] - Reading Scans, Scan Num = 59000 Process 1: [pXtract] - Reading Scans, Scan Num = 41000 Process 2: [pXtract] - Reading Scans, Scan Num = 60000 Process 1: [pXtract] - Reading Scans, Scan Num = 42000 Process 2: [pXtract] - Reading Scans, Scan Num = 61000 Process 1: [pXtract] - Reading Scans, Scan Num = 43000 Process 2: [pXtract] - Reading Scans, Scan Num = 62000 Process 1: [pXtract] - Reading Scans, Scan Num = 44000 Process 2: [pXtract] - Reading Scans, Scan Num = 63000 Process 1: [pXtract] - Reading Scans, Scan Num = 45000 Process 2: [pXtract] - Reading Scans, Scan Num = 64000 Process 1: [pXtract] - Reading Scans, Scan Num = 46000 Process 2: [pXtract] - Reading Scans, Scan Num = 65000 Process 1: [pXtract] - Reading Scans, Scan Num = 47000 Process 2: [pXtract] - Reading Scans, Scan Num = 66000 Process 1: [pXtract] - Reading Scans, Scan Num = 48000 Process 2: [pXtract] - Reading Scans, Scan Num = 67000 Process 1: [pXtract] - Reading Scans, Scan Num = 49000 Process 2: [pXtract] - Reading Scans, Scan Num = 68000 Process 1: [pXtract] - Reading Scans, Scan Num = 50000 Process 2: [pXtract] - Reading Scans, Scan Num = 69000 Process 1: [pXtract] - Reading Scans, Scan Num = 51000 Process 2: [pXtract] - Reading Scans, Scan Num = 70000 Process 1: [pXtract] - Reading Scans, Scan Num = 52000 Process 2: [pXtract] - Reading Scans, Scan Num = 71000 Process 1: [pXtract] - Reading Scans, Scan Num = 53000 Process 2: [pXtract] - Reading Scans, Scan Num = 72000 Process 1: [pXtract] - Reading Scans, Scan Num = 54000 Process 2: [pXtract] - Reading Scans, Scan Num = 73000 Process 1: [pXtract] - Reading Scans, Scan Num = 55000 Process 2: [pXtract] - Reading Scans, Scan Num = 74000 Process 1: [pXtract] - Reading Scans, Scan Num = 56000 Process 2: [pXtract] - Reading Scans, Scan Num = 75000 Process 1: [pXtract] - Reading Scans, Scan Num = 57000 Process 2: [pXtract] - Reading Scans, Scan Num = 76000 Process 1: [pXtract] - Reading Scans, Scan Num = 58000 Process 2: [pXtract] - Reading MS1:12739, MS2:63586, total:76325 Process 1: [pXtract] - Reading Scans, Scan Num = 59000 Process 2: [pXtract] - Output Files Completed! Process 1: [pXtract] - Reading Scans, Scan Num = 60000 Process 2: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.mzML Process 1: [pXtract] - Reading Scans, Scan Num = 61000 Process 2: [pXtract] - == == == Time elapsed: 52,627s. == == == Process 1: [pXtract] - Reading Scans, Scan Num = 62000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.ms1 Process 1: [pXtract] - Reading Scans, Scan Num = 63000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.ms2 Process 1: [pXtract] - Reading Scans, Scan Num = 64000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03.pf1 Process 1: [pXtract] - Reading Scans, Scan Num = 65000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03_HCDFT.pf2 Process 1: [pXtract] - Reading Scans, Scan Num = 66000 Process 2: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03_HCDFT.mgf Process 1: [pXtract] - Reading Scans, Scan Num = 67000 Process 2: [pParse] - Extracting MS2, Scan Num = 1000 Process 1: [pXtract] - Reading Scans, Scan Num = 68000 Process 2: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pXtract] - Reading Scans, Scan Num = 69000 Process 2: [pParse] - Extracting MS2, Scan Num = 2000 Process 1: [pXtract] - Reading Scans, Scan Num = 70000 Process 2: [pParse] - Extracting MS2, Scan Num = 3000 Process 1: [pXtract] - Reading Scans, Scan Num = 71000 Process 2: [pParse] - Extracting MS2, Scan Num = 4000 Process 1: [pXtract] - Reading Scans, Scan Num = 72000 Process 2: [pParse] - Extracting MS2, Scan Num = 5000 Process 1: [pXtract] - Reading Scans, Scan Num = 73000 Process 2: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pXtract] - Reading Scans, Scan Num = 74000 Process 2: [pParse] - Extracting MS2, Scan Num = 6000 Process 1: [pXtract] - Reading Scans, Scan Num = 75000 Process 2: [pParse] - Extracting MS2, Scan Num = 7000 Process 1: [pXtract] - Reading Scans, Scan Num = 76000 Process 2: [pParse] - Extracting MS2, Scan Num = 8000 Process 1: [pXtract] - Reading Scans, Scan Num = 77000 Process 2: [pParse] - Extracting MS1, Scan Num = 3000 Process 1: [pXtract] - Reading Scans, Scan Num = 78000 Process 2: [pParse] - Extracting MS2, Scan Num = 9000 Process 1: [pXtract] - Reading Scans, Scan Num = 79000 Process 2: [pParse] - Extracting MS2, Scan Num = 10000 Process 1: [pXtract] - Reading Scans, Scan Num = 80000 Process 2: [pParse] - Extracting MS2, Scan Num = 11000 Process 1: [pXtract] - Reading MS1:12174, MS2:68503, total:80677 Process 2: [pParse] - Extracting MS2, Scan Num = 12000 Process 1: [pXtract] - Output Files Completed! Process 2: [pParse] - Extracting MS2, Scan Num = 13000 Process 1: [pXtract] - Extracted C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.mzML Process 2: [pParse] - Extracting MS1, Scan Num = 4000 Process 1: [pXtract] - == == == Time elapsed: 55,931s. == == == Process 2: [pParse] - Extracting MS2, Scan Num = 14000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms1 Process 2: [pParse] - Extracting MS2, Scan Num = 15000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms2 Process 2: [pParse] - Extracting MS2, Scan Num = 16000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.pf1 Process 2: [pParse] - Extracting MS2, Scan Num = 17000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.pf2 Process 2: [pParse] - Extracting MS1, Scan Num = 5000 Process 1: [pParse] - Start to process C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.mgf Process 2: [pParse] - Extracting MS2, Scan Num = 19000 Process 1: [pParse] - Extracting MS1, Scan Num = 1000 Process 1: [pParse] - Extracting MS2, Scan Num = 3000 Process 2: [pParse] - Extracting MS1, Scan Num = 6000 Process 2: [pParse] - Extracting MS2, Scan Num = 24000 Process 1: [pParse] - Extracting MS1, Scan Num = 2000 Process 1: [pParse] - Extracting MS2, Scan Num = 9000 Process 1: [pParse] - Extracting MS1, Scan Num = 3000 Process 1: [pParse] - Extracting MS2, Scan Num = 14000 Process 1: [pParse] - Extracting MS1, Scan Num = 4000 Process 1: [pParse] - Extracting MS2, Scan Num = 19000 Process 1: [pParse] - Extracting MS1, Scan Num = 5000 Process 1: [pParse] - Extracting MS2, Scan Num = 24000 Process 1: [pParse] - Extracting MS1, Scan Num = 6000 Process 1: [pParse] - Extracting MS2, Scan Num = 31000 Process 1: [pParse] - Extracting MS1, Scan Num = 7000 Process 1: [pParse] - Extracting MS2, Scan Num = 38000 Process 1: [pParse] - Extracting MS1, Scan Num = 8000 Process 1: [pParse] - Extracting MS2, Scan Num = 45000 Process 1: [pParse] - Extracting MS1, Scan Num = 9000 Process 1: [pParse] - Extracting MS2, Scan Num = 53000 Process 1: [pParse] - Extracting MS1, Scan Num = 10000 Process 1: [pParse] - Extracting MS2, Scan Num = 67000 Process 1: [pParse] - Extracting MS1, Scan Num = 11000 Process 1: [pParse] - Extracting MS2, Scan Num = 68000 Process 1: [pParse] - Extracting MS1, Scan Num = 12000 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms1 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms1 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms1: 12174 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.pf1 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.pf1 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.pf1: 12174 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms2 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms2 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.ms2: 68503 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.pf2 Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.pf2 Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.pf2: 68503 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.mgf Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.mgf Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.mgf: 68503 Process 1: [pParse] - Closed C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.csv Process 1: [pParse] - Finished Operations on C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.csv Process 1: [pParse] - Scan Number in C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239.csv: 68503 Process 1: [pParse] - == == == Time elapsed: 222 seconds. == == == = [pFind] ######################################### [pFind] # # [pFind] # Welcome to use pFind search engine! # [pFind] # # [pFind] # version 3.1.5 # [pFind] # # [pFind] # http://pfind.ict.ac.cn # [pFind] # # [pFind] ######################################### [pFind] Fasta path: C:\Users\robbe\pFind\humancrap.fasta [pFind] Generating accession list... [pFind] Create accession list: C:\Users\robbe\pFind\humancrap.fasta_td.pac [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_01_20200717061234_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 3514.16 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 3362.18. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_02_20200717083719_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 3148.50 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 3987.78. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_CTRL_03_20200717110239_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 3461.43 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 3448.01. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_01_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 2447.44 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 2449.01. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_02_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 2424.17 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 2418.52. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] MSMS path: C:\Users\robbe\Mzml_files\PXD022545\2020-07-14_MS_PG_Proteome_Davide_Casserini_H2O2_03_HCDFT.pf2 [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Search time: 2595.37 [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] Round: 1 / 1 [pFind] : 100% [pFind] Time Used: 2556.88. [pFind] Inferring proteins... [pFind] Inferring proteins completed. [pFind] : 100% [pFind] == == == Total Time elapsed of Identification: 35946.5 seconds. == == == [pFind] Initialize... [pFind] TDA started... [pFind] TDA completed. Overall ID Rate: 0 / 134 = 0% [pFind] == == == Total Time elapsed of Filter: 2.9 seconds. == == == ***********Total Time: 35958.69*********** == == == == == Total Time Used for This Task: 10:03:07 == == == == ==