Issue 32: [pGlyco] pGlyco3 and multiple sister scans - pFind Forum

Title	[pGlyco] pGlyco3 and multiple sister scans
Priority	question	Status	finished
Superseder		Nosy List	daniel, jalew188
Assigned To	jalew188	Keywords	pGlyco

Created on 2021-07-02.06:38:08 by daniel, last changed by ctarn.

Messages
msg98 (view)	Author: jalew188	Date: 2021-07-03.02:30:33
pGlyco3 only looks at the nearest ETD scan. And it is also the case for site- specific glycan localization (SSGL).
msg96 (view)	Author: daniel	Date: 2021-07-02.06:38:08
For one of our data sets, our spectrometer was run in a mode where the detection of a diagnostic ion in an HCD scan would trigger 2 ETD scans (at different energies). When I'm running pGlyco3 it appears to only associate the 1st ETD scan with the HCD scan. I've verified this by looking at the HCDpdETXXDF.mgf file. Is pGlyco3 able to identify multiple Sister Scans?

History
Date	User	Action	Args
2021-07-06 15:38:38	ctarn	set	status: chatting -> finished
2021-07-03 15:29:46	ctarn	set	title: pGlyco3 and multiple sister scans -> [pGlyco] pGlyco3 and multiple sister scans assignedto: jalew188
2021-07-03 02:30:36	jalew188	set	messages: + msg98 status: unread -> chatting nosy: + jalew188
2021-07-02 06:38:11	daniel	create