Title [pFind] Modification mass calculation in pConfig
Priority question Status finished
Superseder Nosy List ZeyuWang, kfwang
Assigned To kfwang Keywords pConfig, pFind

Created on 2022-05-22.04:53:35 by ZeyuWang, last changed by kfwang.

File name Uploaded Type Edit Remove
Snipaste_2022-05-20_15-16-36.png ZeyuWang, 2022-05-22.04:55:14 image/png
Snipaste_2022-05-20_15-33-31.png ZeyuWang, 2022-05-22.04:54:20 image/png
msg240 (view) Author: kfwang Date: 2022-06-12.19:24:26

This difference exists but does not affect the software results. Specifically, the 
mass of Label_13C(6)[R] is provided by Unimod, and the mass of SILAC_Arg6 added by 
user is obtained by pConfig by calculating the atomic mass.

Kaifei Wang
msg235 (view) Author: ZeyuWang Date: 2022-05-22.04:53:35
I notice that the same modification (same composition) calculated by pConfig is 
slightly different from the default one.  I modified the isotope mass in 
element.ini based on your article ( but 
the mass difference is still there.
Date User Action Args
2022-07-05 20:11:39kfwangsetstatus: chatting -> finished
2022-06-12 19:24:28kfwangsetmessages: + msg240
status: unread -> chatting
2022-05-22 15:53:57ctarnsetnosy: + kfwang, - ctarn
assignedto: ctarn -> kfwang
2022-05-22 04:55:14ZeyuWangsetfiles: + Snipaste_2022-05-20_15-16-36.png
2022-05-22 04:54:20ZeyuWangsetfiles: + Snipaste_2022-05-20_15-33-31.png
2022-05-22 04:53:36ZeyuWangcreate