Issue9

Title [pLink] For DSSO, does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD?
Priority question Status finished
Superseder [pLink] pLink 2 currently only supports MS1-MS2 (CID+ETD) data
View: 4
Nosy List ctarn, megatron, pzmao
Assigned To pzmao Keywords

Created on 2021-03-22.04:22:17 by megatron, last changed by ctarn.

Messages
msg30 (view) Author: pzmao Date: 2021-03-22.23:57:35
Hi,

1. For pLink that has been released, CID+ETD(MS2) flow requires having both 
CID and ETD spectra.

2. For DSSO(CID+EThcD)/DSSO(HCD+ETD)/DSSO(HCD+EThcD), pLink is not well 
supported at the moment. XlinkX is recommended.

3. pLink is developing a SteppedHCD(MS2) flow. Please, look forward to it. It 
will have better performance.

Thank you for your interest in pLink.
msg29 (view) Author: megatron Date: 2021-03-22.04:22:17
Hello,
I got to know that pLink currently only supports CID+ETD MS/MS for DSSO. I have 
two questions for DSSO below down,
1. If the data only contains one single fragmentation (CID or ETD), but not 
both CID and ETD, would the pLink search and analyse this data normally?

2. Does the pLink support DSSO(CID+EThcD)?

3. Does the pLink support DSSO(HCD+ETD) or DSSO(HCD+EThcD)?

Thank you.
History
Date User Action Args
2021-03-24 14:04:17ctarnsetstatus: chatting -> finished
title: For DSSO, does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD ? -> [pLink] For DSSO, does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD?
2021-03-22 23:57:39pzmaosetmessages: + msg30
status: unread -> chatting
2021-03-22 20:00:53ctarnsetnosy: + pzmao, ctarn, - lonelu
assignedto: lonelu -> pzmao
2021-03-22 20:00:12megatronsetpriority: feature -> question
2021-03-22 04:28:19megatronsettitle: Does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD ? -> For DSSO, does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD ?
2021-03-22 04:27:46megatronsettitle: DSSO(CID+ETD) -> Does pLink support only CID or ETD, CID+EThcD, HCD+ETD, HCD+EThcD ?
2021-03-22 04:22:20megatroncreate