Title The mass spectrometry data collected in DDA mode is in raw. format, and the library is directly searched by pfind, and the number of matching peptides and proteins are both 0.
Priority bug Status finished
Superseder Nosy List kfwang, tjj
Assigned To Keywords

Created on 2022-09-23.00:01:30 by tjj, last changed by kfwang.

File name Uploaded Type Edit Remove
problem.docx tjj, 2022-09-23.00:01:30 application/vnd.openxmlformats-officedocument.wordprocessingml.document
msg280 (view) Author: kfwang Date: 2022-09-26.12:37:01

Please send me the raw and .fasta file to facilitate the reproduction of the 
If the website limits the size of attachments, they can be sent to

Kaifei Wang
msg279 (view) Author: tjj Date: 2022-09-23.00:01:30
Mass spectral data collected in DDA mode, MS/MS scan as IT, fragmentation mode CID, use pfind to read RAW. format files, 12 samples were tried, and the number of matching peptides and proteins was always 0, in other software there are 300+ matching peptides, and I feel that there is a problem with the data reading. I would like to ask the teacher where the problem is and how to solve it.
Date User Action Args
2022-09-26 12:37:03kfwangsetmessages: + msg280
nosy: + kfwang
2022-09-23 00:01:32tjjcreate